Package: dendroextras 0.2.3
dendroextras: Extra Functions to Cut, Label and Colour Dendrogram Clusters
Provides extra functions to manipulate dendrograms that build on the base functions provided by the 'stats' package. The main functionality it is designed to add is the ability to colour all the edges in an object of class 'dendrogram' according to cluster membership i.e. each subtree is coloured, not just the terminal leaves. In addition it provides some utility functions to cut 'dendrogram' and 'hclust' objects and to set/get labels.
Authors:
dendroextras_0.2.3.tar.gz
dendroextras_0.2.3.zip(r-4.5)dendroextras_0.2.3.zip(r-4.4)dendroextras_0.2.3.zip(r-4.3)
dendroextras_0.2.3.tgz(r-4.4-any)dendroextras_0.2.3.tgz(r-4.3-any)
dendroextras_0.2.3.tar.gz(r-4.5-noble)dendroextras_0.2.3.tar.gz(r-4.4-noble)
dendroextras_0.2.3.tgz(r-4.4-emscripten)dendroextras_0.2.3.tgz(r-4.3-emscripten)
dendroextras.pdf |dendroextras.html✨
dendroextras/json (API)
NEWS
| # Install 'dendroextras' in R: |
| install.packages('dendroextras', repos = c('https://jefferis.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/jefferis/dendroextras/issues
Last updated 7 years agofrom:aba9a65be9. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 17 2024 |
| R-4.5-win | OK | Oct 17 2024 |
| R-4.5-linux | OK | Oct 17 2024 |
| R-4.4-win | OK | Oct 17 2024 |
| R-4.4-mac | OK | Oct 17 2024 |
| R-4.3-win | OK | Oct 17 2024 |
| R-4.3-mac | OK | Oct 17 2024 |
Exports:color_clusterscolour_clusterslabels<-leaf_coloursset_leaf_colorsset_leaf_coloursslice
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Extra functions to cut, label and colour dendrogram clusters | dendroextras-package dendroextras |
| Colour sub-clusters of a tree (dendrogram/hclust) object | color_clusters colour_clusters |
| Find labels of hclust object (in dendrogram order) | labels.hclust |
| Set the labels of an object | labels<- labels<-.dendrogram |
| Return the leaf colours of a dendrogram | leaf_colors leaf_colours |
| Set the leaf colours of a dendrogram | set_leaf_colors set_leaf_colours |
| Cut a tree-like object into groups numbered in tree order | slice |
